STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114861498High affinity choline transporter 1-like. (567 aa)    
Predicted Functional Partners:
LOC114864572
Choline transporter-like protein 1.
     
 0.692
SLC44A1
Choline transporter-like protein 1.
     
 0.692
LOC114869590
Solute carrier family 22 member 5-like.
   
 
 0.587
LOC114869593
Solute carrier family 22 member 5-like.
   
 
 0.572
LOC114867083
Proline dehydrogenase 1, mitochondrial-like.
  
  
 0.547
prodh2
Proline dehydrogenase 2.
  
  
 0.547
LOC114869591
Solute carrier family 22 member 4-like.
   
 
 0.523
LOC114869691
Solute carrier family 22 member 5-like.
   
 
 0.523
LOC114862134
Choline transporter-like protein 2.
     
 0.519
LOC114860161
Choline transporter-like protein 2.
     
 0.519
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.