STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114861499Leiomodin-2-like. (542 aa)    
Predicted Functional Partners:
gps1
G protein pathway suppressor 1.
    
  0.715
cops3
COP9 signalosome subunit 3.
    
  0.714
cops7a
COP9 signalosome subunit 7A.
    
  0.661
basp1
Brain abundant membrane attached signal protein 1.
    
  0.654
COPS6
COP9 signalosome subunit 6.
    
  0.641
nrap
Nebulin related anchoring protein.
   
 0.631
tlnrd1
Talin rod domain containing 1.
     
 0.614
myl1
Myosin light chain 1.
   
 
 0.613
ENSBSLP00000014666
annotation not available
    
  0.549
hspa5
Heat shock protein family A (Hsp70) member 5.
    
  0.549
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.