STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114846132Protein Tob1-like. (338 aa)    
Predicted Functional Partners:
CNOT8
CCR4-NOT transcription complex subunit 8.
    
 0.894
LOC114864120
CCR4-NOT transcription complex subunit 7.
    
 0.894
cnot1
CCR4-NOT transcription complex subunit 1.
    
 0.886
cnot11
CCR4-NOT transcription complex subunit 11.
    
 0.881
cnot10
CCR4-NOT transcription complex subunit 10.
    
 0.881
cnot9
CCR4-NOT transcription complex subunit 9.
    
 0.820
ssrp1
Structure specific recognition protein 1.
    
  0.813
cpeb3
Cytoplasmic polyadenylation element binding protein 3.
    
 0.794
CPEB4
Cytoplasmic polyadenylation element binding protein 4.
    
 0.794
btg1
BTG anti-proliferation factor 1.
  
  
 
0.793
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.