STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
helbDNA helicase B. (1098 aa)    
Predicted Functional Partners:
TYMP
Thymidine phosphorylase.
  
 0.957
LOC114850449
Cytidine deaminase-like.
  
 
 0.933
tpi1
Triosephosphate isomerase 1.
  
 0.922
mpi
Mannose phosphate isomerase.
    
 0.896
taldo1
Transaldolase 1.
    
 0.893
SMARCAL1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1.
   
  0.883
rbks
Ribokinase.
    
 0.877
pola1
DNA polymerase alpha 1, catalytic subunit.
    
  0.862
adhfe1
Alcohol dehydrogenase iron containing 1.
  
 
 0.858
sord
Sorbitol dehydrogenase.
  
 
  0.857
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.