STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atp11cATPase phospholipid transporting 11C. (1140 aa)    
Predicted Functional Partners:
tmem30a
Transmembrane protein 30A.
   
 0.844
LOC114847283
Cell cycle control protein 50C-like.
   
 0.844
LOC114848893
Cell cycle control protein 50A-like.
   
 0.844
LOC114847215
Thioredoxin domain-containing protein 3 homolog.
   
 0.840
LOC114848228
Cell cycle control protein 50B-like.
   
 0.802
ATP8A1
ATPase phospholipid transporting 8A1.
  
  
0.636
atp8a2
ATPase phospholipid transporting 8A2.
  
  
0.635
LOC114842936
Copper-transporting ATPase 2-like.
  
 0.613
atp7a
ATPase copper transporting alpha.
  
 0.613
LOC114867991
FXYD domain-containing ion transport regulator 6-like.
    
  0.570
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.