STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114866430Caspase-3-like. (262 aa)    
Predicted Functional Partners:
xiap
X-linked inhibitor of apoptosis.
   
 0.948
parp1
poly(ADP-ribose) polymerase 1.
   
 0.931
LOC114869611
Inhibitor of apoptosis protein-like.
   
 0.927
apaf1
Apoptotic peptidase activating factor 1.
    
 0.925
cenpn
Centromere protein N.
   
 0.916
casp9
Caspase 9.
    
0.914
LOC114846480
Baculoviral IAP repeat-containing protein 5.2-like.
   
 0.902
cenpi
Centromere protein I.
   
 0.901
cenpp
Centromere protein P.
   
 0.897
cenpm
Centromere protein M.
   
 0.894
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.