STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sufuSUFU negative regulator of hedgehog signaling. (492 aa)    
Predicted Functional Partners:
ENSBSLP00000021696
annotation not available
    
 0.979
stk36
Serine/threonine kinase 36.
    
 0.979
ulk4
Unc-51 like kinase 4.
    
 0.979
gli1
GLI family zinc finger 1.
    
 0.969
gli3
GLI family zinc finger 3.
    
 0.939
gli2
GLI family zinc finger 2.
    
 0.904
LOC114845644
Zinc finger protein GLI2-like.
    
 0.904
SPOP
Speckle-type POZ protein.
     
 0.879
spopl
Speckle type BTB/POZ protein like.
     
 0.879
kif7
Kinesin family member 7.
    
 0.851
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.