STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114865592Leucine-rich repeat-containing protein 14B-like. (504 aa)    
Predicted Functional Partners:
LOC114845443
Ankyrin repeat and SOCS box protein 12-like.
   
  
 0.498
pik3ip1
Phosphoinositide-3-kinase interacting protein 1.
      
 0.475
asb16
Ankyrin repeat and SOCS box containing 16.
   
  
 0.472
lrrc20
Leucine rich repeat containing 20.
      
 0.471
lrrc38
Leucine rich repeat containing 38.
      
 0.446
tmem38a
Transmembrane protein 38A.
   
  
 0.434
osbpl6
Oxysterol binding protein like 6.
      
 0.432
LOC114864639
Ankyrin repeat and SOCS box protein 12-like.
   
  
 0.420
osbpl7
Oxysterol binding protein like 7.
      
 0.416
asb5
Ankyrin repeat and SOCS box containing 5.
      
 0.416
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.