STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
krit1KRIT1 ankyrin repeat containing. (749 aa)    
Predicted Functional Partners:
ccm2
CCM2 scaffold protein.
    
 
 0.973
itgb1bp1
Integrin subunit beta 1 binding protein 1.
    
 
 0.973
rap1b
RAP1B, member of RAS oncogene family.
    
 0.951
LOC114858554
Ras-related protein Rap-1A.
    
 0.951
LOC114855366
Ras-related protein Rap-1A-like.
    
 0.951
snx17
Sorting nexin 17.
    
 
 0.944
heg1
Heart development protein with EGF like domains 1.
    
 
 0.943
ccm2l
CCM2 like scaffold protein.
    
 
 0.916
ctnnb1
Catenin beta 1.
     
 0.882
RAP2B
RAP2B, member of RAS oncogene family.
    
 0.800
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.