STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msmo1Methylsterol monooxygenase 1. (316 aa)    
Predicted Functional Partners:
LOC114866236
Lanosterol 14-alpha demethylase.
  
 0.988
hsd17b7
Hydroxysteroid 17-beta dehydrogenase 7.
   
 0.985
sqle
Squalene epoxidase.
   
 0.982
nsdhl
NAD(P) dependent steroid dehydrogenase-like.
  
 0.979
sigmar1
Sigma non-opioid intracellular receptor 1.
   
 0.967
fdft1
Farnesyl-diphosphate farnesyltransferase 1.
  
 0.955
lbr
Lamin B receptor.
   
 0.938
lss
Lanosterol synthase.
   
 0.938
tm7sf2
Transmembrane 7 superfamily member 2.
   
 0.938
LOC114844605
25-hydroxycholesterol 7-alpha-hydroxylase.
  
 0.929
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.