STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
isoc2Isochorismatase domain containing 2. (286 aa)    
Predicted Functional Partners:
rgn
Regucalcin.
  
 
 0.906
QPRT
Quinolinate phosphoribosyltransferase.
  
 0.899
LOC114865924
2-iminobutanoate/2-iminopropanoate deaminase-like.
  
 
 0.875
rida
Reactive intermediate imine deaminase A homolog.
  
 
 0.875
IDNK
IDNK gluconokinase.
    
  0.870
oplah
5-oxoprolinase, ATP-hydrolysing.
    
  0.863
rbp7
Nicotinamide nucleotide adenylyltransferase 1.
    
 0.860
nmnat2
Nicotinamide nucleotide adenylyltransferase 2.
    
 0.860
ENSBSLP00000054977
Nicotinamide nucleotide adenylyltransferase 3.
    
 0.860
ift46
Intraflagellar transport 46.
  
 
 0.853
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.