STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atg12Autophagy related 12. (73 aa)    
Predicted Functional Partners:
atg7
Autophagy related 7.
    
 0.999
atg5
Autophagy related 5.
   
 0.999
atg3
Autophagy related 3.
    
 0.998
atg16l1
Autophagy related 16 like 1.
    
 0.989
LOC114867572
Autophagy-related protein 16-2-like.
    
 0.989
wdfy3
WD repeat and FYVE domain containing 3.
    
 0.968
atg10
Autophagy related 10.
    
 0.966
LOC114848314
Flocculation protein FLO11-like.
    
 0.950
wipi2
WD repeat domain, phosphoinositide interacting 2.
    
 0.944
gabarapl2
GABA type A receptor associated protein like 2.
   
 0.944
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.