STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cux2Cut like homeobox 2. (1526 aa)    
Predicted Functional Partners:
orc3
Origin recognition complex subunit 3.
    
 
 0.694
gosr1
Golgi SNAP receptor complex member 1.
    
 0.535
LOC114869859
Golgi SNAP receptor complex member 1-like.
    
 0.535
LOC114870611
Peripheral plasma membrane protein CASK-like.
   
 
 0.512
cask
Calcium/calmodulin dependent serine protein kinase.
   
 
 0.512
oma1
OMA1 zinc metallopeptidase.
      
 0.489
cog3
Component of oligomeric golgi complex 3.
    
 0.484
ccdc92
Coiled-coil domain containing 92.
      
 0.476
mecom
MDS1 and EVI1 complex locus.
    
 
 0.476
prpf3
pre-mRNA processing factor 3.
   
  
 0.475
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.