STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114864014Rho GTPase-activating protein 22-like. (401 aa)    
Predicted Functional Partners:
LOC114855655
Cell division control protein 42 homolog.
    
 0.593
LOC114859401
Cell division control protein 42 homolog.
    
 0.593
LOC114842974
Cell division control protein 42 homolog.
    
 0.511
LOC114866173
Cell division control protein 42 homolog.
    
 0.511
rnd3
Rho family GTPase 3.
   
 0.494
LOC114866462
Rho-related GTP-binding protein RhoF-like.
   
 0.482
LOC114859109
Rho-related GTP-binding protein Rho6.
   
 0.481
RND1
Rho-related GTP-binding protein Rho6-like.
   
 0.481
LOC114855843
Rho-related GTP-binding protein RhoA-B.
    
 0.478
LOC114859359
Rho-related GTP-binding protein RhoA-B-like.
    
 0.478
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.