STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
klhl2Kelch like family member 2. (634 aa)    
Predicted Functional Partners:
LOC114868724
Cullin-3.
    
 0.899
CUL3
Cullin-3-like.
    
 0.899
pef1
penta-EF-hand domain containing 1.
    
 0.807
pdcd6
Programmed cell death 6.
    
 0.807
klhl7
Kelch like family member 7.
  
 
 
0.801
klhl20
Kelch like family member 20.
  
 
 
0.796
klhl8
Kelch like family member 8.
  
 
 
0.794
kbtbd8
Kelch repeat and BTB domain containing 8.
  
 
0.791
klhl22
Kelch like family member 22.
  
 
 
0.791
LOC114856205
Protein SEC13 homolog.
    
 0.789
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.