STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cacng6Calcium voltage-gated channel auxiliary subunit gamma 6. (247 aa)    
Predicted Functional Partners:
CAMK2B
Calcium/calmodulin-dependent protein kinase type II subunit beta.
   
 
 0.846
cacng3
Calcium voltage-gated channel auxiliary subunit gamma 3.
 
   
 0.824
LOC114860494
Voltage-dependent calcium channel gamma-5 subunit-like.
     
 0.816
LOC114860516
Voltage-dependent calcium channel gamma-1 subunit-like.
   
 
 
0.812
LOC114841850
Calcium/calmodulin-dependent protein kinase type II delta 1 chain.
   
 
 0.781
camk2a
Calcium/calmodulin dependent protein kinase II alpha.
   
 
 0.781
LOC114866304
Calcium/calmodulin-dependent protein kinase type II delta 2 chain.
   
 
 0.781
cacnb1
Calcium voltage-gated channel auxiliary subunit beta 1.
   
 
 0.735
LOC114867109
Voltage-dependent N-type calcium channel subunit alpha-1B-like.
   
 
  0.721
LOC114858622
Voltage-dependent L-type calcium channel subunit beta-4-like.
   
 
 0.717
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.