STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114857196Solute carrier family 25 member 44-like. (317 aa)    
Predicted Functional Partners:
cstf3
Cleavage stimulation factor subunit 3.
     
 0.801
impdh2
Inosine monophosphate dehydrogenase 2.
    
   0.497
LOC114857394
Inosine-5'-monophosphate dehydrogenase 1a-like.
    
   0.497
LOC114862121
Inosine-5'-monophosphate dehydrogenase 1b.
    
   0.497
LOC114864146
Beta-1,4-galactosyltransferase 1-like.
   
 
  0.470
LOC114864147
Beta-1,4-galactosyltransferase 1-like.
   
 
  0.470
LOC114854399
Beta-1,4-galactosyltransferase 1-like.
   
 
  0.470
LOC114842789
Beta-1,4-galactosyltransferase 3-like.
   
 
  0.470
b4galt2
Beta-1,4-galactosyltransferase 2.
   
 
  0.470
b4galt3
Beta-1,4-galactosyltransferase 3.
   
 
  0.470
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.