STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114846502Thyroid hormone receptor alpha-B. (440 aa)    
Predicted Functional Partners:
med1
Mediator complex subunit 1.
    
 0.919
ncor2
Nuclear receptor corepressor 2.
    
 0.854
med24
Mediator complex subunit 24.
    
 0.854
ncor1
Nuclear receptor corepressor 1.
    
 0.854
hdac3
Histone deacetylase 3.
    
 0.849
med17
Mediator complex subunit 17.
    
  0.840
med14
Mediator complex subunit 14.
    
  0.839
med12
Mediator complex subunit 12.
    
  0.839
med4
Mediator complex subunit 4.
    
  0.829
LOC114853923
Retinoic acid receptor RXR-gamma-B-like.
    
0.826
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.