STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114856360R-spondin-4-like. (240 aa)    
Predicted Functional Partners:
znrf3
Zinc and ring finger 3.
   
 0.918
rnf43
Ring finger protein 43.
   
 0.911
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
  
 0.909
lgr4
Leucine rich repeat containing G protein-coupled receptor 4.
  
 0.909
LGR6
Leucine rich repeat containing G protein-coupled receptor 6.
    
 0.893
frem1
FRAS1 related extracellular matrix 1.
    
 0.856
LOC114843039
R-spondin-3-like.
  
  
 
0.844
rspo1
R-spondin 1.
  
  
 
0.802
rspo2
R-spondin 2.
  
  
 
0.801
LOC114853555
E3 ubiquitin-protein ligase RNF126-like.
   
 0.761
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.