STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acot13acyl-CoA thioesterase 13. (142 aa)    
Predicted Functional Partners:
ubiad1
UbiA prenyltransferase domain containing 1.
    
 0.916
fdx1
Ferredoxin 1.
  
 
  0.775
fdx2
Ferredoxin 2.
  
 
  0.775
acot7
acyl-CoA thioesterase 7.
    
 0.759
echs1
enoyl-CoA hydratase, short chain 1.
  
 0.723
LOC114854606
Probable enoyl-CoA hydratase.
  
 0.717
ECHDC1
ethylmalonyl-CoA decarboxylase 1.
  
 0.717
nqo1
NAD(P)H quinone dehydrogenase 1.
  
 
 0.716
LOC114847802
Ribosyldihydronicotinamide dehydrogenase [quinone]-like.
  
 
 0.716
eci2
enoyl-CoA delta isomerase 2.
  
 0.686
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.