STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114865377CTP synthase 1. (597 aa)    
Predicted Functional Partners:
gmps
Guanine monophosphate synthase.
  
 0.950
eprs1
glutamyl-prolyl-tRNA synthetase 1.
  
 0.946
ALDH18A1
Delta-1-pyrroline-5-carboxylate synthase-like.
  
 0.901
LOC114845667
Delta-1-pyrroline-5-carboxylate synthase-like.
  
 0.901
dars2
aspartyl-tRNA synthetase 2, mitochondrial.
  
 
 0.898
LOC114847215
Thioredoxin domain-containing protein 3 homolog.
  
 
 0.893
polr1a
RNA polymerase I subunit A.
   
 
 0.889
polr1b
RNA polymerase I subunit B.
  
 
 0.883
LOC114860271
40S ribosomal protein SA.
  
 0.882
rars1
arginyl-tRNA synthetase 1.
  
 
 0.881
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.