STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114862310Muskelin. (742 aa)    
Predicted Functional Partners:
LOC114864745
E3 ubiquitin-protein transferase RMND5B-like.
    
 0.975
ranbp10
RAN binding protein 10.
    
 0.927
ranbp9
RAN binding protein 9.
    
 0.927
LOC114850164
WD repeat-containing protein 26.
   
 0.911
LOC114842738
WD repeat-containing protein 26-like.
   
 0.911
LOC114855002
SPRY domain-containing protein 3-like.
    
 0.851
LOC114859021
SPRY domain-containing protein 3-like.
    
 0.851
LOC114857710
Ubiquitin-conjugating enzyme E2 H-like.
     
 0.817
ube2h
Ubiquitin conjugating enzyme E2 H.
     
 0.817
armc8
Armadillo repeat containing 8.
   
 
 0.807
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.