STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TOM1L2Target of myb1 like 2 membrane trafficking protein. (595 aa)    
Predicted Functional Partners:
LOC114848822
Unconventional myosin-VI-like.
    
 
 0.889
tollip
Toll interacting protein.
    
 
 0.763
mst1r
Macrophage stimulating 1 receptor.
    
  0.692
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.692
LOC114856141
Macrophage-stimulating protein receptor-like.
    
  0.692
arl15
ADP ribosylation factor like GTPase 15.
    
 0.686
ENSBSLP00000037400
ADP-ribosylation factor 6a.
    
 0.686
ENSBSLP00000055953
ADP-ribosylation factor 6b.
    
 0.686
rps27a
Ribosomal protein S27a.
    
   0.680
ENSBSLP00000037601
Ubiquitin B.
    
   0.668
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.