STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc27a1Solute carrier family 27 member 1. (653 aa)    
Predicted Functional Partners:
aasdh
Aminoadipate-semialdehyde dehydrogenase.
  
 0.944
nup205
Nucleoporin 205.
   
 0.941
nup155
Nucleoporin 155.
   
 0.921
got2
Glutamic-oxaloacetic transaminase 2.
    
 0.904
palb2
Partner and localizer of BRCA2.
  
 0.892
ndufab1
NADH:ubiquinone oxidoreductase subunit AB1.
  
 0.892
med23
Mediator complex subunit 23.
    
 0.890
med14
Mediator complex subunit 14.
   
 0.890
coasy
Coenzyme A synthase.
  
 
 0.888
med29
Mediator complex subunit 29.
    
 0.882
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.