STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114843854Oxygen-regulated protein 1-like. (2187 aa)    
Predicted Functional Partners:
pot1
Protection of telomeres 1.
    
 0.899
cdc73
Cell division cycle 73.
   
 0.896
rtf1
RTF1 homolog, Paf1/RNA polymerase II complex component.
    
 0.892
paf1
PAF1 homolog, Paf1/RNA polymerase II complex component.
   
 0.875
c8b
Complement C8 beta chain.
   
 0.848
LOC114864554
Aurora kinase B-like.
    
 0.826
aurka
Aurora kinase A.
    
 0.826
c6
Regulator of G-protein signaling 7-binding protein B-like.
   
 0.816
cinp
Cyclin dependent kinase 2 interacting protein.
    
 0.814
ctr9
CTR9 homolog, Paf1/RNA polymerase II complex component.
    
 0.814
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.