STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
c17h7orf25Chromosome 17 C7orf25 homolog. (419 aa)    
Predicted Functional Partners:
psma2
Proteasome 20S subunit alpha 2.
 
   
 0.764
wdr83
WD repeat domain 83.
 
 
    0.648
sec61g
SEC61 translocon gamma subunit.
      
 0.538
dpcd
Deleted in primary ciliary dyskinesia homolog (mouse).
      
 0.527
nrbf2
Nuclear receptor binding factor 2.
      
 0.527
vopp1
VOPP1 WW domain binding protein.
      
 0.521
LOC114845037
Biliverdin reductase A-like.
      
 0.483
ENSBSLP00000028374
Proteasome 20S subunit beta 3.
     
 0.459
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.