STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arhgef18Rho/Rac guanine nucleotide exchange factor 18. (1447 aa)    
Predicted Functional Partners:
LOC114858233
Rho-related GTP-binding protein RhoA-C-like.
   
 0.924
cgn
Cingulin.
     
 0.853
stk11
Serine/threonine kinase 11.
     
 0.842
LOC114844026
Rho guanine nucleotide exchange factor 18-like.
  
  
 
0.842
ENSBSLP00000056273
Erythrocyte membrane protein band 4.1 like 4B.
     
 0.839
LOC114855843
Rho-related GTP-binding protein RhoA-B.
   
 0.826
LOC114859359
Rho-related GTP-binding protein RhoA-B-like.
   
 0.826
LOC114858620
Rho-related GTP-binding protein RhoA-D-like.
   
 0.826
LOC114856260
Rho-related GTP-binding protein RhoA-D.
   
 0.826
LOC114859320
Rho-related GTP-binding protein RhoA-C.
   
 0.826
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.