STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zmynd19Zinc finger MYND-type containing 19. (227 aa)    
Predicted Functional Partners:
LOC114864745
E3 ubiquitin-protein transferase RMND5B-like.
    
 
 0.826
armc8
Armadillo repeat containing 8.
    
 
 0.751
maea
Macrophage erythroblast attacher.
      
 0.555
hacl1
2-hydroxyacyl-CoA lyase 1.
    
   0.457
LOC114862310
Muskelin.
    
 
 0.454
rabac1
Rab acceptor 1.
      
 0.433
LOC114862710
Melanin-concentrating hormone receptor 1-like.
      
 0.420
LOC114857031
Deformed epidermal autoregulatory factor 1 homolog.
      
 0.418
tbc1d31
TBC1 domain family member 31.
      
 0.403
dph7
Diphthamide biosynthesis 7.
 
 
    0.402
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.