STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zhx2Zinc fingers and homeoboxes 2. (886 aa)    
Predicted Functional Partners:
LOC114868516
Rab5 GDP/GTP exchange factor-like.
   
 0.964
LOC114862273
Rab5 GDP/GTP exchange factor-like.
   
 0.964
LOC114869334
Rab5 GDP/GTP exchange factor-like.
   
 0.964
appl1
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.
    
 
 0.887
APPL1
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.
    
 
 0.887
appl2
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2.
    
 
 0.887
rbsn
Rabenosyn, RAB effector.
   
 0.851
als2
Alsin Rho guanine nucleotide exchange factor ALS2.
    
 0.843
LOC114847070
Alsin-like.
    
 0.843
pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.812
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.