STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARAP1ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1. (1585 aa)    
Predicted Functional Partners:
asap3
ArfGAP with SH3 domain, ankyrin repeat and PH domain 3.
   
0.796
LOC114858416
arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1-like.
     
0.715
rap1b
RAP1B, member of RAS oncogene family.
    
 0.638
LOC114858554
Ras-related protein Rap-1A.
    
 0.638
LOC114855366
Ras-related protein Rap-1A-like.
    
 0.638
LOC114855843
Rho-related GTP-binding protein RhoA-B.
    
  0.620
LOC114859359
Rho-related GTP-binding protein RhoA-B-like.
    
  0.620
LOC114858620
Rho-related GTP-binding protein RhoA-D-like.
    
  0.620
LOC114856260
Rho-related GTP-binding protein RhoA-D.
    
  0.620
LOC114859320
Rho-related GTP-binding protein RhoA-C.
    
  0.620
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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