STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114856042Fibromodulin-like. (348 aa)    
Predicted Functional Partners:
LOC114867748
Transforming growth factor beta-1 proprotein-like.
    
 0.898
TGFB3
Transforming growth factor beta-3 proprotein-like.
   
 0.872
tgfb3
Transforming growth factor beta 3.
   
 0.872
LOC114864697
Transforming growth factor beta-2 proprotein-like.
    
 0.861
tgfb2
Transforming growth factor beta 2.
    
 0.861
ENSBSLP00000031093
Zgc:113307.
  
 
 
0.851
LOC114858308
Fibromodulin-like.
  
  
 
0.842
lum
Lumican.
  
 
0.821
LOC114843883
netrin-G1-like.
   
 0.750
ntng1
Netrin G1.
   
 0.750
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.