STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prdm12PR/SET domain 12. (377 aa)    
Predicted Functional Partners:
suv39h1
Suppressor of variegation 3-9 homolog 1.
    
 0.710
LOC114845477
Histone-lysine N-methyltransferase PRDM9-like.
    
 
0.692
kmt2e
Lysine methyltransferase 2E.
     
 0.677
dot1l
DOT1 like histone lysine methyltransferase.
     
 0.663
kmt5a
Lysine methyltransferase 5A.
    
 0.558
LOC114862215
N-lysine methyltransferase KMT5A-B-like.
    
 0.558
KMT2A
Lysine methyltransferase 2A.
    
 0.528
kmt2b
Lysine methyltransferase 2B.
    
 0.528
LOC114866253
Histone-lysine N-methyltransferase 2B-like.
    
 0.528
smyd3
SET and MYND domain containing 3.
    
 0.519
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.