ENSBSLP00000031291 protein (Betta splendens)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSBSLP00000031291

annotation not available (89 aa)

Predicted Functional Partners:

leo1

0.691

eci2

0.644

wdr90

0.623

gak

0.609

mars1

0.584

pla2g4a

0.580

traf7

0.564

ubxn7

0.562

ift81

0.539

katnal2

0.538

Your Current Organism:

Betta splendens

NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSBSLP00000031291	eci2	ENSBSLP00000031291	ENSBSLP00000012697	annotation not available	enoyl-CoA delta isomerase 2.	0.644
ENSBSLP00000031291	gak	ENSBSLP00000031291	ENSBSLP00000013277	annotation not available	Cyclin G associated kinase.	0.609
ENSBSLP00000031291	ift81	ENSBSLP00000031291	ENSBSLP00000030013	annotation not available	Intraflagellar transport 81.	0.539
ENSBSLP00000031291	katnal2	ENSBSLP00000031291	ENSBSLP00000023867	annotation not available	Katanin catalytic subunit A1 like 2.	0.538
ENSBSLP00000031291	leo1	ENSBSLP00000031291	ENSBSLP00000008253	annotation not available	LEO1 homolog, Paf1/RNA polymerase II complex component.	0.691
ENSBSLP00000031291	mars1	ENSBSLP00000031291	ENSBSLP00000054038	annotation not available	methionyl-tRNA synthetase 1.	0.584
ENSBSLP00000031291	pla2g4a	ENSBSLP00000031291	ENSBSLP00000046928	annotation not available	Phospholipase A2 group IVA.	0.580
ENSBSLP00000031291	traf7	ENSBSLP00000031291	ENSBSLP00000008834	annotation not available	TNF receptor associated factor 7.	0.564
ENSBSLP00000031291	ubxn7	ENSBSLP00000031291	ENSBSLP00000031875	annotation not available	UBX domain protein 7.	0.562
ENSBSLP00000031291	wdr90	ENSBSLP00000031291	ENSBSLP00000039384	annotation not available	WD repeat domain 90.	0.623
eci2	ENSBSLP00000031291	ENSBSLP00000012697	ENSBSLP00000031291	enoyl-CoA delta isomerase 2.	annotation not available	0.644
eci2	katnal2	ENSBSLP00000012697	ENSBSLP00000023867	enoyl-CoA delta isomerase 2.	Katanin catalytic subunit A1 like 2.	0.490
gak	ENSBSLP00000031291	ENSBSLP00000013277	ENSBSLP00000031291	Cyclin G associated kinase.	annotation not available	0.609
gak	katnal2	ENSBSLP00000013277	ENSBSLP00000023867	Cyclin G associated kinase.	Katanin catalytic subunit A1 like 2.	0.405
gak	traf7	ENSBSLP00000013277	ENSBSLP00000008834	Cyclin G associated kinase.	TNF receptor associated factor 7.	0.588
ift81	ENSBSLP00000031291	ENSBSLP00000030013	ENSBSLP00000031291	Intraflagellar transport 81.	annotation not available	0.539
katnal2	ENSBSLP00000031291	ENSBSLP00000023867	ENSBSLP00000031291	Katanin catalytic subunit A1 like 2.	annotation not available	0.538
katnal2	eci2	ENSBSLP00000023867	ENSBSLP00000012697	Katanin catalytic subunit A1 like 2.	enoyl-CoA delta isomerase 2.	0.490
katnal2	gak	ENSBSLP00000023867	ENSBSLP00000013277	Katanin catalytic subunit A1 like 2.	Cyclin G associated kinase.	0.405
katnal2	traf7	ENSBSLP00000023867	ENSBSLP00000008834	Katanin catalytic subunit A1 like 2.	TNF receptor associated factor 7.	0.555