STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tm2d3TM2 domain containing 3. (261 aa)    
Predicted Functional Partners:
pigh
Phosphatidylinositol glycan anchor biosynthesis class H.
   
 
 0.809
pigc
Phosphatidylinositol glycan anchor biosynthesis class C.
     
 0.804
pigl
Phosphatidylinositol glycan anchor biosynthesis class L.
     
 0.803
pigp
Phosphatidylinositol glycan anchor biosynthesis class P.
   
 
 0.799
dpm2
Dolichyl-phosphate mannosyltransferase subunit 2, regulatory.
   
 
  0.792
piga
Phosphatidylinositol glycan anchor biosynthesis class A.
     
 0.768
pigw
Phosphatidylinositol glycan anchor biosynthesis class W.
     
 0.692
polk
DNA polymerase kappa.
 
      0.585
nhlrc2
NHL repeat containing 2.
      
 0.550
lamtor4
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 4.
      
 0.536
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.