STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnase2Deoxyribonuclease 2, lysosomal. (377 aa)    
Predicted Functional Partners:
LOC114854460
Deoxyribonuclease-2-beta-like.
  
  
 
0.848
gns
Glucosamine (N-acetyl)-6-sulfatase.
   
 0.717
bloc1s1
Biogenesis of lysosomal organelles complex 1 subunit 1.
   
 
  0.672
LOC114844571
AP-1 complex subunit gamma-1-like.
     
 0.620
ap1g1
Adaptor related protein complex 1 subunit gamma 1.
     
 0.620
LOC114862899
Vesicle-associated membrane protein 8-like.
     
 0.618
LOC114850375
Deoxyribonuclease-2-alpha-like.
  
  
 
0.560
LOC114851266
Deoxyribonuclease-2-alpha-like.
  
  
 
0.558
dnajc10
DnaJ heat shock protein family (Hsp40) member C10.
   
  0.528
sulf1
Sulfatase 1.
    
 0.524
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.