STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114855420Immunoglobulin-like and fibronectin type III domain-containing protein 1. (1185 aa)    
Predicted Functional Partners:
wdr18
WD repeat domain 18.
   
 0.771
tex10
Testis expressed 10.
   
 0.708
pes1
Pescadillo ribosomal biogenesis factor 1.
   
 0.663
calm3
Calmodulin 3.
    
 0.647
LOC114849035
Calmodulin.
    
 0.647
LOC114849214
Calmodulin.
    
 0.647
myl1
Myosin light chain 1.
   
 0.611
calm2
Calmodulin 2.
    
 0.606
CALML6
Calglandulin-like.
    
 0.594
myl7
Myosin light chain 7.
   
 0.587
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.