STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ankk1Ankyrin repeat and kinase domain containing 1. (724 aa)    
Predicted Functional Partners:
LOC114848647
T-cell surface glycoprotein CD3 zeta chain-like.
   
 0.813
tab1
TGF-beta activated kinase 1 (MAP3K7) binding protein 1.
  
 0.795
traf6
TNF receptor associated factor 6.
   
 0.787
mib2
Mindbomb E3 ubiquitin protein ligase 2.
   
0.751
uevld
UEV and lactate/malate dehyrogenase domains.
   
 0.732
myd88
MYD88 innate immune signal transduction adaptor.
   
 0.725
fadd
Fas associated via death domain.
   
 0.708
cd3e
CD3e molecule.
   
 0.703
ttc12
Tetratricopeptide repeat domain 12.
  
 0.700
tradd
TNFRSF1A associated via death domain.
    
 0.691
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.