STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rps6kc1Ribosomal protein S6 kinase C1. (1123 aa)    
Predicted Functional Partners:
rint1
RAD50 interactor 1.
   
 0.995
stx18
Syntaxin 18.
    
 0.994
use1
Unconventional SNARE in the ER 1.
    
 0.994
zw10
Zw10 kinetochore protein.
    
 0.993
stx5
Syntaxin 5.
    
 0.956
stx10
Syntaxin 10.
    
 0.954
stx6
Syntaxin 6.
    
 0.954
stx8
Syntaxin 8.
    
 0.954
stx16
Syntaxin 16.
    
 0.951
gosr2
Golgi SNAP receptor complex member 2.
   
 
 0.948
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.