STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114854548PH domain leucine-rich repeat protein phosphatase 1-like. (1713 aa)    
Predicted Functional Partners:
uchl3
Ubiquitin C-terminal hydrolase L3.
    
 0.876
LOC114847215
Thioredoxin domain-containing protein 3 homolog.
    
 0.848
sugt1
SGT1 homolog, MIS12 kinetochore complex assembly cochaperone.
    
 
 0.806
cap2
Cyclase associated actin cytoskeleton regulatory protein 2.
    
 
 0.790
cap1
Cyclase associated actin cytoskeleton regulatory protein 1.
    
 
 0.790
mocs1
Molybdenum cofactor synthesis 1.
  
 
 0.789
itpa
Inosine triphosphatase.
    
  0.787
nme6
NME/NM23 nucleoside diphosphate kinase 6.
    
 0.784
nppc
Natriuretic peptide C.
    
 0.738
LOC114869279
RAC-beta serine/threonine-protein kinase-like.
    
 0.703
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (24%) [HD]