STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAMP5Lysosomal associated membrane protein family member 5. (243 aa)    
Predicted Functional Partners:
nprl2
NPR2 like, GATOR1 complex subunit.
    
 
 0.661
rptor
Regulatory associated protein of MTOR complex 1.
    
 
 0.657
nprl3
NPR3 like, GATOR1 complex subunit.
    
 
 0.647
wdr24
WD repeat domain 24.
    
 
 0.642
wdr59
WD repeat domain 59.
    
 
 0.636
SZT2
SZT2 subunit of KICSTOR complex.
    
   0.636
mios
Meiosis regulator for oocyte development.
    
   0.636
kptn
Kaptin, actin binding protein.
    
   0.636
depdc5
DEP domain containing 5, GATOR1 subcomplex subunit.
    
   0.636
LOC114856205
Protein SEC13 homolog.
    
 
 0.609
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.