STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC39A3Solute carrier family 39 member 3. (316 aa)    
Predicted Functional Partners:
LOC114857482
Sorting and assembly machinery component 50 homolog A.
    
 0.903
samm50
SAMM50 sorting and assembly machinery component.
    
 0.903
mtx3
Metaxin 3.
    
 0.897
LOC114842747
Metaxin-1-like.
    
 0.897
TOMM7
Translocase of outer mitochondrial membrane 7.
    
 0.870
tomm70
Translocase of outer mitochondrial membrane 70.
    
 0.798
ENSBSLP00000034664
annotation not available
    
 0.797
tomm22
Translocase of outer mitochondrial membrane 22.
    
 0.797
pikfyve
Phosphoinositide kinase, FYVE-type zinc finger containing.
     
 0.716
ankzf1
Ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1.
   
 
  0.710
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.