STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114842789Beta-1,4-galactosyltransferase 3-like. (390 aa)    
Predicted Functional Partners:
fut8
Fucosyltransferase 8.
     
 0.872
pomgnt1
Protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-).
   
 0.867
LOC114869449
Beta-galactoside alpha-2,6-sialyltransferase 1-like.
     
 0.864
st6gal2
ST6 beta-galactoside alpha-2,6-sialyltransferase 2.
     
 0.864
LOC114854589
Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase A-like.
   
 
 0.854
st3gal3
ST3 beta-galactoside alpha-2,3-sialyltransferase 3.
     
 0.853
b4galt3
Beta-1,4-galactosyltransferase 3.
  
  
 
0.853
LOC114845170
CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase-like.
     
 0.853
b3gat2
Beta-1,3-glucuronyltransferase 2.
 
 
 
 0.852
ENSBSLP00000050335
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5b.
   
 
 0.851
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.