STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114843373Heat shock cognate 71 kDa protein-like. (667 aa)    
Predicted Functional Partners:
gak
Cyclin G associated kinase.
   
 0.995
bag3
BCL2 associated athanogene 3.
   
 0.966
stip1
Stress induced phosphoprotein 1.
  
 0.936
grpel1
GrpE like 1, mitochondrial.
  
 0.922
LOC114849323
Heat shock protein HSP 90-alpha 1.
 
 0.922
dnajc10
DnaJ heat shock protein family (Hsp40) member C10.
  
 0.912
tsc1
TSC complex subunit 1.
  
 0.911
hsp90ab1
Heat shock protein 90 alpha family class B member 1.
 
 0.908
LOC114845735
STIP1 homology and U box-containing protein 1-like.
    
 0.900
CLPB
ClpB homolog, mitochondrial AAA ATPase chaperonin.
  
 
 0.894
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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