STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114863546Tudor domain-containing protein 7A-like. (1173 aa)    
Predicted Functional Partners:
piwil1
Piwi like RNA-mediated gene silencing 1.
   
 0.792
LOC114861785
Piwi-like protein 2.
   
 0.772
LOC114861792
Piwi-like protein 2.
   
 0.772
dicer1
Dicer 1, ribonuclease III.
  
 
 0.691
dhx9
DExH-box helicase 9.
   
 0.653
ALPK1
Alpha kinase 1.
   
    0.627
NT5E
5'-nucleotidase-like.
    
 0.614
atic
5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase.
  
 
  0.604
uprt
Uracil phosphoribosyltransferase homolog.
    
 0.599
QPRT
Quinolinate phosphoribosyltransferase.
    
  0.594
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.