STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114853904Acyl-coenzyme A thioesterase 11-like. (585 aa)    
Predicted Functional Partners:
LOC114864912
Malate synthase-like.
    
 0.884
sucla2
succinate-CoA ligase ADP-forming beta subunit.
    
 0.840
suclg2
succinate-CoA ligase GDP-forming beta subunit.
  
 
 0.828
dlat
Dihydrolipoamide S-acetyltransferase.
    
  0.821
aldh7a1
Aldehyde dehydrogenase 7 family member A1.
   
 0.820
mlycd
malonyl-CoA decarboxylase.
    
 0.811
suclg1
succinate-CoA ligase alpha subunit.
    
  0.811
cwc25
CWC25 spliceosome associated protein homolog.
   
    0.803
rubcnl
Rubicon like autophagy enhancer.
   
    0.803
c11h1orf109
Chromosome 11 C1orf109 homolog.
   
    0.803
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.