STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tap1Transporter 1, ATP binding cassette subfamily B member. (737 aa)    
Predicted Functional Partners:
LOC114866127
Tapasin-like.
   
 0.957
LOC114853834
Calreticulin-like.
   
 0.895
pdia3
Protein disulfide isomerase family A member 3.
  
 0.890
LOC114844940
Calreticulin-like.
   
 0.882
LOC114865478
Protein disulfide-isomerase A3-like.
  
  0.875
LOC114845343
Antigen peptide transporter 2-like.
  
  
0.871
LOC114866099
Antigen peptide transporter 2-like.
  
 
0.868
ccdc51
Coiled-coil domain containing 51.
    
 0.748
pdia4
Protein disulfide isomerase family A member 4.
  
 0.724
ENSBSLP00000029314
annotation not available
   
 0.715
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.