STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114857544Kit ligand-like. (269 aa)    
Predicted Functional Partners:
csf1r
Colony stimulating factor 1 receptor.
   
 0.983
LOC114854103
Mast/stem cell growth factor receptor Kit-like.
   
 0.980
LOC114852997
Mast/stem cell growth factor receptor kita-like.
   
 0.980
flt3
Fms related tyrosine kinase 3.
    
 0.927
pdgfra
Platelet derived growth factor receptor alpha.
    
 0.927
tie1
Tyrosine kinase with immunoglobulin like and EGF like domains 1.
    
 0.921
pdgfrb
Platelet derived growth factor receptor beta.
    
 0.910
flt1
Fms related tyrosine kinase 1.
    
 0.909
LOC114867840
Tyrosine kinase receptor Cad96Ca-like.
    
 0.899
LOC114869682
Platelet-derived growth factor receptor beta-like.
    
 0.899
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.