STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114855892Cyclic AMP-dependent transcription factor ATF-7-like. (479 aa)    
Predicted Functional Partners:
LOC114843559
Cyclic AMP-responsive element-binding protein 5-like.
    
0.914
LOC114854282
Transcription factor AP-1-like.
   
0.899
LOC114867319
Transcription factor jun-D-like.
   
0.899
LOC114858846
Cyclic AMP-dependent transcription factor ATF-4-like.
    
 0.848
crebbp
CREB binding protein.
   
 0.847
LOC114851074
CREB-binding protein-like.
   
 0.847
LOC114860359
Mitogen-activated protein kinase 1-like.
   
 0.835
LOC114845515
Mitogen-activated protein kinase 7-like.
   
 0.835
mapk1
Mitogen-activated protein kinase 1.
   
 0.835
LOC114849948
Proto-oncogene c-Fos-like.
    
0.833
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.