STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mutyhmutY DNA glycosylase. (526 aa)    
Predicted Functional Partners:
nthl1
Nth like DNA glycosylase 1.
  
 
0.941
nudt15
Nudix hydrolase 15.
  
 
 0.924
apex1
Apurinic/apyrimidinic endodeoxyribonuclease 1.
   
 0.898
apex2
Apurinic/apyrimidinic endodeoxyribonuclease 2.
   
 0.887
pcna
Proliferating cell nuclear antigen.
   
 
 0.843
ALDH18A1
Delta-1-pyrroline-5-carboxylate synthase-like.
  
  
 0.747
LOC114845667
Delta-1-pyrroline-5-carboxylate synthase-like.
  
  
 0.747
hus1
HUS1 checkpoint clamp component.
    
 
 0.743
msh2
mutS homolog 2.
   
 
 0.688
msh6
mutS homolog 6.
   
 
 0.670
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.