STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hip1rHuntingtin interacting protein 1 related. (1085 aa)    
Predicted Functional Partners:
gak
Cyclin G associated kinase.
   
 0.998
htt
Huntingtin.
    
 0.948
cltb
Clathrin light chain B.
    
 0.936
clta
Clathrin light chain A.
    
 0.936
LOC114867906
Clathrin heavy chain 1-like.
    
 0.891
LOC114861976
Clathrin heavy chain 1-like.
    
 0.891
cltc
Clathrin heavy chain.
    
 0.891
ap2a1
Adaptor related protein complex 2 subunit alpha 1.
    
 0.887
ift57
Intraflagellar transport 57.
    
 0.881
dnajc6
DnaJ heat shock protein family (Hsp40) member C6.
   
 0.843
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.